Abstract
The Epidendroideae (Orchidaceae) is one of the orchids largest subfamilies with substantially larger number of genera and species than all other subfamilies altogether. Taxa incorporated in the subfamily Epidendroideae are characterized by the largest variety and diversity of forms. Once in a while, the classification inside the Epidendroideae subfamily undergoes modifications. It is because different scientists base their classification system on different features. This paper shows is to show relationship between genera within the subfamily Epidendroideae (with the particular consideration of the tribes Dendrobieae and Epidendreae) on the basis of the analysis of the nucleotide sequence matK gene.
Funding
Scientific work financed from the resources earmarked for science in years 2004-2007 as the Research Project no. 2 P04C 051 27.
References
CHASE M. W. & HILLS H. H. 1991. Silica gel: An ideal material for field preservation of leaf samples for DNA studies. Taxon 40: 215-220. DOI: https://doi.org/10.2307/1222975
CHASE M. W., CAMERON K. M., BARRETT R. L. & FREUDENSTEIN J. V. 2003. DNA data and Orchidaceae systematics: a new phylogenetic classification. In: K. M. DIXSON, S. P. KELL, R. L. BARRETT & P. J. CRIBB (eds.). Orchid Conservation, pp. 69-89. Natural History Publications.
DRESSLER R. L. 1981. The Orchids: Natural History and Classification. 332 pp. Harvard University Press, Cambridge.
DRESSLER R. L. 1993. Phylogeny and classification of the orchid family. 312 pp. Dioscorides Press, Portland-Oregon.
FELSENSTEIN J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791. DOI: https://doi.org/10.1111/j.1558-5646.1985.tb00420.x
FITCH W. M. 1971. Towards defining the course of evolution: Minimum change for a specific tree topology. Systematic Zoology 20: 406-416. DOI: https://doi.org/10.1093/sysbio/20.4.406
GOLDMAN D. H., FREUDENSTEIN J. V., KORES P. J., MOLVRAY M., JARRELL D. C., WHITTEN W. M., CAMERON K. M. & CHASE M. W. 2001. Phylogenetics of Arethuseae (Orchidaceae) based on plastid matK and rbcL sequences. Systematic Botany 26: 670-695.
JOHNSON L. A. & SOLTIS D. E. 1994. MatK DNA sequences and phylogenetic reconstruction in Saxifragaceae. Systematic Botany 19: 143-156. DOI: https://doi.org/10.2307/2419718
KORES P. J., WESTON P. H., MOLVRAY M. & CHASE M. W. 2000. Phylogenetic relationships within the Diurideae (Orchidaceae): inferences from platid matK DNA sequences. In: K. L. WILSON & MORRISON D. A. (eds.). Monocots: systematics and evolution, pp. 449-456. CSIRO Publishing, Collingwood, Victoria, Australia.
MOLVRAY M., KORES P. J. & CHASE M. W. 2000. Polyphyly of mycoheterotrophic orchids and functional inflyences on floral and molecular characters. In: K. L. WILSON &MORRISON D. A. (eds.). Monocots: systematics and evolution, pp. 441-448. CSIRO Publishing, Collingwood, Victoria, Australia.
PRIDGEON A. M., SOLANO R. & CHASE M. W. 2001. Phylogenetic relationships in Pleurothallidinae (Orchidaceae): combined evidence from nuclear and plastid DNA sequences. Am. J. Bot. 88(12): 2286-2308. DOI: https://doi.org/10.2307/3558390
RASMUSSEN F. N. 1985. Orchids. In: R. M. DAHLGREN, H. T. CLIFFORD & P. F. YEO (eds.). The families of the monocotyledons, pp. 249-274. Springer Verlag, Berlin.
SALAZAR G. A., CHASE M. W., SOTO ARENAS M. A. & INGROUILLE M. 2003. Phylogenetics of Cranichideae with emphasis on Spiranthinae (Orchidaceae, Orchidoideae): evidence from plastid and nuclear DNA sequences. Am. J. Bot. 90: 777-795. DOI: https://doi.org/10.3732/ajb.90.5.777
SCHLECHTER R. 1926. Das System der Orchidaceen. Notizbl. Bot. Gart. Mus. Berlin-Dahlem 9(88): 563-591. DOI: https://doi.org/10.2307/3994326
SOLTIS D. E. & SOLTIS P. S. 1998. Choosing an approach and appropriate gene for phylogenetic analysis. In: D. E. SOLTIS, P. E. SOLTIS & J. J. DOYLE (eds.). Molecular Systematics of Plants II: DNA sequencing, pp. 1-42. Kluwer Academic Publishers, Boston Massachusetts, USA. DOI: https://doi.org/10.1007/978-1-4615-5419-6_1
SWOFFORD D. L. 2000. PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods). Version 4.0b2. Sinauer Associates, Sunderland MA.
SZLACHETKO D. L. 1995. Systema Orchidalium. Fragm. Flor. Geobot. Suppl. 3: 1-137.
THOMPSON J. D., GIBSON T. J., PLEWNIAK F., JEANMOUGIN F. & HIGGINS D. G. 1997. TheClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nuclei Acids Research 24: 4876-4882. DOI: https://doi.org/10.1093/nar/25.24.4876
VAN DEN BERG C., GOLDMAN D. H., FREUDENSTEIN J. V., PRIDGEON A. M., CAMERON K. M. & CHASE M. W. 2005. An overview of the phylogenetic relationships within Epidendroideae inferred from multiple DNA regions and recircumscription of Epidendreae and Arethuseae (Orchidaceae). Am. J. Bot. 92(4): 613-624. DOI: https://doi.org/10.3732/ajb.92.4.613
VAN DEN BERG C., HIGGINS W. E., DRESSLER R. L., WHITTEN W. M., SOTO ARENAS M. A.,CULHAM A. & CHASE M. W. 2000. A phylogenetic analysis of Laeliinae (Orchidaceae) based on sequence data from internal transcribed spacers (ITS) of nuclear ribosomal DNA. Lindleyana 15: 96-114.
WHITTEN W. M., WILLIAMS N. H. & CHASE M. W. 2000. Subtribal and generic relationships of Maxillarieae (Orchidaceae) with emphasis on Stanhopeinae: combined molecular evidence. Am. J. Bot. 87(12): 1842-1856. DOI: https://doi.org/10.2307/2656837
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